This is an example of a resistance dashboard. It is intended as a template for you to use locally and adapt to your needs.
It is distributed under an MIT license, meaning I can’t accept any responsiblity for stuff going wrong as a result of it, but you are completely free to use and adapt it to any end you see fit.
Below are some auto-calculations about the pipeline that I think are useful to see:
This pipeline was run on the 07/11/2024
It includes isolates from 01/06/2023 to the 01/06/2024
This dataset includes 101 organisms, from 100 specimens, from 90 different patients.
If you would like help localising this or have a problem please open a GitHub issue. If you want to get in touch or to can’t share your question publicaly then email me <a href=“mailto:j.goodall8@sheffield.ac.ukc?subject=resistance%20dashboard%20feature%20request”